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Cage - Compendium of Arabidopsis gene expression

From 01-11-2002 to 31-10-2005
Website: http://www.biomatnet.org/secure/FP5/S1713.htm

Description

The CAGE project will demonstrate the power of a concerted effort to build a gene expression knowledge base. A consortium of European Arabidopsis functional genomics centres has teamed up with bioinformatics partners that contribute expertise in microarray data processing, analysis and storage/distribution. A total of 2 000 Arabidopsis samples will be produced and analysed under largely standardised conditions. These samples will be profiled on CATMA microarrays containing gene-specific probes for most Arabidopsis genes, to build a prototype compendium of expression profiles. The data will be assessed for statistical significance and submitted to the ArrayExpress database at the European Bioinformatics Institute (EBI). EBI will deliver specific CAGE ontology, and data submission pipelines. The compendium data will be annotated and analysed for content and confirmation of gene function. The compendium will be maintained by EBI.

Team

    Financing

    Funding: -

    Events

    2/09/2024:
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    3/09/2024:
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