• McKnow : Automated and user-oriented methods and algorithms for knowledge management (2001-2005)
• SQUAD : Molecular and computational biology of quorum signaling in bacterial pathogens : Salmonella (2002-2007)
• SILICOS : Research towards an in silico drug discovery platform (virtual screening factory) based on specrophore technology (2005-2007)
• Flight Test Easy+ : Optimised design engineering process for aerospace structures (2005-2007)
• BioScop-IT : Bioinformatics service project (2005-2008) (IWT/040571)
• Endometriosis Test : Development of a noninvasive diagnostic test for endometriosis (2007-2009)
• IOTA 3 Ovarian tumour characterisation – Multicentre prospective assessment study on the preoperative characterisation of ovarian tumours based on predictive computer models (2008-2012) (070706/IWT TBM)
• DSquare – D Square data mining (2008-2011) (IWT/080222/O&O BDM)
• CLIMAQs – Climate impact and air quality modelling for policy support (2008-2011) (IWT-SBO-080019)
• LOGIC –  Insulin algorithm –  The single-centre and multi-centre clinical validation of an algorithm to control blood glucose levels in critically ill patients (2011-2015) (IWT-TBM)
• Rectal cancer – Response prediction of rectal cancer based on molecular and functional characteristics of the tumor.  (2011-2014) (IWT-TBM-Haustermans)
• Novel strategies for organ sparing in patients with complete response to radiochemotherapy in locally advanced rectal cancer (20142017)
• Endometrial cancer diagnosis based on predictive computer models within an international Endometrial Tumour Analysys (IETA) collaboration (2013-2017)