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CHDEPCC:05.04.01

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ASD

  Chromosomal map of CHD genes and imbalances.

Non syndromic associated genes overview

CITED2 (2, 4.8%)
CFC1/CRYPTIC (2, 4.8%)
TBX20 (3, 7.1%)
GATA6 (3, 7.1%)
GATA4 (11, 26.2%)
NKX2-5/NKX2.5 (21, 50%)

Atrial septal defect (ASD) is a form of congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The interatrial septum is the tissue that divides the right and left atria. Without this septum, or if there is a defect in this septum, it is possible for blood to travel from the left side of the heart to the right side of the heart, or vice versa. Irrespective of interatrial communication bi-directions, this results in the mixing of arterial and venous blood. Classification of atrial septal defects:

  • ASD type secundum: exists within the floor of the oval fossa
  • Sinus venosus ASD: the interatrial communication in sinus venosus ASD is located outside the floor of the fossa ovalis, in the mouth of usually the superior, but sometimes the inferior, vena cava.
  • Coronary sinus ASD: coronary sinus ASD results from a wide fenestration between the wall of the sinus coronarius and the left atrium. Coronary sinus ASD is often associated with persistent left superior vena cava.
  • Primum ASD: exists between the leading edge of the atrial septum and the upper margin of the ventricular septum. A primum ASD is a partial atrioventricular septal defect (see Atrioventricular septal defect).

Notice: for all gene-phenotype associations involving ASD type secundum or not further specified ASDs, see atrial septal defect.

External references for ASD

Genes for phenotype 05.04.01:ASD

Non-syndromic

  
 MYH7 edit association
  • Support: likely: 2 or more patients (with CHD and a mutation in the candidate gene)
  • References: PMID:18159245 (single case report modify)
  • Inheritance: Non-syndromic ASD in association with left ventricle non-compaction (LVNC) and Ebstein's anomaly.
  • Incidence: Heterozygous MYH7 mutations were identified in 8 of 141 samples (6%) (Postma AV et al., 2010).
  • Comments:
  • Studies: (1)
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 GATA4 edit association
  • Support: confirmed: 2 or more independent reports > 1% incidence
  • References: PMID:15810002 (population study with screening of similar CHD patients and normal controls modify) PMID:15689439 (population study with screening of similar CHD patients and normal controls modify) PMID:12845333 (single case report modify) PMID:15235040 (single case report modify) PMID:18055909 (population study with screening of similar CHD patients and normal controls modify) PMID:18076106 (single case report modify) PMID:20347099 (single case report modify) PMID:20854389 (single case report modify) PMID:21373748 (population study with screening of similar CHD patients and normal controls modify)
  • Inheritance: Nonsyndromic dominant atrial septal defect type 2 (OMIM:607941).
  • Incidence: One mutation in GATA4 was identified in two out of 16 unrelated families with ASD. Additionally, two mutations in NKX2.5 were found in 2 out of 16 unrelated families with ASD and one mutation in NKX2.5 in one out of 13 sporadic patients with ASD (Sarkozy A et al., 2005). Two GATA4 mutations were identified in 2 out of 16 unrelated families with ASD. Additionally, three mutations in NKX2.5 were found in 3 of these families (Hirayama-Yamada K et al., 2005). Two mutations in GATA4 were identified in two large families with ASD type secundum. The mutation was found in all available affected family members but not in any control individuals (Garg V et al., 2003). A mutation in GATA4 was found in all available affected members of a family with ASD and pulmonary valvar stenosis (Okubo A et al., 2004). Four novel GATA4 mutations were found in 5 out of 628 subjects with various sporadic CHD. Three of these mutations were identified in 3 out of 122 subjects with ASD type secundum (Tomita-Mitchell A et al., 2007). One mutation in GATA4 was found in 1 out of 170 subjects with sporadic ASD type secundum. The ASD was associated with partially anomalous pulmonary venous connections (Posch MG et al., 2008).
  • Comments:
  • Studies: (10)
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 CFC1/CRYPTIC edit association
  • Support: likely: 2 or more patients (with CHD and a mutation in the candidate gene)
  • References: PMID:17072672 (population study with screening of similar CHD patients and normal controls modify) PMID:19853937 (population study with screening of similar CHD patients and normal controls modify)
  • Inheritance: Isolated sporadic atrial septal defect type 2
  • Incidence: CFC1 mutations may be a relatively infrequent cause of sporadic CHD in patients without heterotaxy syndrome.
  • Comments:
  • Studies: (2)
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 GATA6 edit association
  • Support: likely: 2 or more patients (with CHD and a mutation in the candidate gene)
  • References: PMID:19666519 (population study with screening of similar CHD patients and normal controls modify)
  • Inheritance: autosomal dominant
  • Incidence: rare
  • Comments:
  • Studies: (2)
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 CITED2 edit association
  • Support: likely: 2 or more patients (with CHD and a mutation in the candidate gene)
  • References: PMID:16287139 (population study with screening of similar CHD patients and normal controls modify)
  • Inheritance: Nonsyndromic cardiac septal defect
  • Incidence: 392 CHD patients 15 nucleotide alterations in CITED2 (7/15 not detected in controls, 3/7 alterations of the amino acid sequence (serine-glycine-rich junction of the protein, to which no functionality had heretofore been assigned) (PMID:16287139)
  • Comments:
  • Studies: (1)
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 TBX20 edit association
  • Support: confirmed: 2 or more independent reports > 1% incidence
  • References: PMID:17668378 (population study with screening of similar CHD patients and normal controls modify) PMID:19762328 (unspecified modify)
  • Inheritance: autosomal dominant inheritance in 2 small families. Variable expression of mutations, 3 out 7 mutation carriers have an ASD.
  • Incidence: Rare cause of ASD (Kirk EP et al., 2007).
  • Comments:
  • Studies: (2)
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 NKX2-5/NKX2.5 edit association
  • Support: confirmed: 2 or more independent reports > 1% incidence
  • References: PMID:9651244 (population study with screening of similar CHD patients and normal controls modify) PMID:15810002 (population study with screening of similar CHD patients and normal controls modify) PMID:15689439 (population study with screening of similar CHD patients and normal controls modify) PMID:14607454 (population study with screening of similar CHD patients and normal controls modify) PMID:12798584 (population study with screening of similar CHD patients and normal controls modify) PMID:10587520 (population study with screening of similar CHD patients and normal controls modify) PMID:12414819 (population study with screening of similar CHD patients and normal controls modify) PMID:12074273 (population study with screening of similar CHD patients and normal controls modify) PMID:12112663 (population study with screening of similar CHD patients and normal controls modify) PMID:16896344 (single case report modify) PMID:10943630 (population study with screening of similar CHD patients and normal controls modify) PMID:17891520 (single case report modify) PMID:16845574 (single case report modify) PMID:17184575 (single case report modify) PMID:20932824 (population study with screening of similar CHD patients and normal controls modify) PMID:20456451 (population study with screening of similar CHD patients and normal controls modify)
  • Inheritance: Dominant. Atrial septal defect +/- AV block (OMIM:108900)
  • Incidence: Sarkozy A et al., 2005 showed a prevalence of 12.5% of NKX2.5 mutations in familial cases of ASD-II, whereas in sporadic cases the estimated prevalence of germline mutations in NKX2.5 is about 1–4% (McElhinney DB et al., 2003, Elliott DA et al., 2006).
  • Comments:
  • Studies: (16)
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Syndromic

  
 FOXC1 edit association
  • Support: likely: 2 or more patients (with CHD and a mutation in the candidate gene)
  • References: PMID:17653043 (single case report modify)
  • Syndromes: Autosomal dominant, Iridogoniodysgenesis type 1 OMIM:#601631
  • Incidence: sporadic or familial
  • Comments:
  • Studies: (1)
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 TBX5 edit association
  • Support: confirmed: 2 or more independent reports > 1% incidence
  • References: PMID:12818525 (population study with screening of similar CHD patients and normal controls modify) PMID:12789647 (population study with screening of similar CHD patients and normal controls modify) PMID:10842287 (population study with screening of similar CHD patients and normal controls modify) PMID:12624158 (population study with screening of similar CHD patients and normal controls modify) PMID:8988165 (population study with screening of similar CHD patients and normal controls modify) PMID:8988164 (population study with screening of similar CHD patients and normal controls modify) PMID:10077612 (population study with screening of similar CHD patients and normal controls modify) PMID:16183809 (population study with screening of similar CHD patients and normal controls modify) PMID:15710732 (population study with screening of similar CHD patients and normal controls modify) PMID:16917909 (population study with screening of similar CHD patients and normal controls modify) PMID:11183182 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: Holt-Oram Syndrome (OMIM:142900): autosomal dominant: preaxial radial ray upper limb defects (thumb anomaly (absent or triphalangeal, nonopposable, finger-like digit, both a proximal and a distal epiphyseal ossification center)) and CHD (ASD type 2 > VSD > ASD type 1)
  • Incidence: 1 family with HOS and ASD (PMID: 8988165); 1 mutation in TBX5 in 2 unrelated families wit HOS and ASD (PMID:12818525); 21 index patients revealed 9 TBX5 mutations, 8 of which have not been previously described (7 mutations are truncating (3 nonsense mutations, 4 small deletions) and 1 splice donor site mutation); VSD in 5/21 (1/5 isolated VSD); ASD in 11/21 (5/11 isolated ASD); isolated AVSD in 1/21 with Holt-Oram syndrome (PMID:16917909)
  • Comments:
  • Studies: (13)
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 SHOC2 edit association
  • Support: likely: 2 or more patients (with CHD and a mutation in the candidate gene)
  • References: PMID:19684605 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: Mutations in SHOC2 were detected in individuals with a consistent phenotype, previously termed Noonan-like syndrome with anagen hair (OMIM:607721).
  • Incidence:
  • Comments:
  • Studies: (1)
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 RAI1 edit association
  • Support: confirmed: 2 or more independent reports > 1% incidence
  • References:
  • Syndromes: Smith Magenis Syndrome
  • Incidence:
  • Comments:
  • Studies: (0)
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 NPHP3 edit association
  • Support: unconfirmed: a single case report
  • References: PMID:18371931 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: Recessive disorder, with various degrees of expressivity (Meckel-Gruber-like Syndrome, Situs Inversus and Renal-Hepatic-Pancreatic Dysplasia)
  • Incidence:
  • Comments:
  • Studies: (1)
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 SOS1 edit association
  • Support: confirmed: 2 or more independent reports > 1% incidence
  • References: PMID:18651097 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: Noonan Syndrome 4 (NS4) (OMIM:610733 or OMIM:163950): autosomal dominant condition characterized by short stature, distinctive facial appearance (triangular face with ptosis, blue-green irides and low posterior hairline or webbed neck), congenital heart defects (pulmonic stenosis, septal defects, and hypertrophic cardiomyopathy) and Woolly-like consistency of hair.
  • Incidence:
  • Comments:
  • Studies: (3)
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 MAP2K2/MEK2 edit association
  • Support: likely: 2 or more patients (with CHD and a mutation in the candidate gene)
  • References: PMID:17704260 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: Cardiofaciocutaneous (CFC) syndrome (OMIM:115150) is an autosomal dominant disorder characterized by distinctive facial appearance (high forehead with bitemporal constriction, hypoplastic supraorbital ridges, downslanting palpebral fissures, a depressed nasal bridge, posteriorly angulated ears with prominent helices), heart defects (pulmonic stenosis, atrial septal defect, and hypertrophic cardiomyopathy), and mental retardation. Ectodermal abnormalities such as sparse and friable hair, hyperkeratotic skin lesions, and a generalized ichthyosis-like condition
  • Incidence:
  • Comments:
  • Studies: (1)
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 KRAS edit association
  • Support: confirmed: 2 or more independent reports > 1% incidence
  • References: PMID:16474405 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: Mutations in KRAS can cause Noonan syndrome or Cardio-facio-cutaneous syndrome:
    • Noonan Syndrome (NS3) (OMIM:609942 or OMIM:163950): characterized by short stature, distinctive facial appearance (triangular face with ptosis, blue-green irides and low posterior hairline or webbed neck), congenital heart defects (pulmonic stenosis, septal defects, and hypertrophic cardiomyopathy) and Woolly-like consistency of hair.
    • Cardiofaciocutaneous (CFC) syndrome (OMIM:115150): distinctive facial appearance (high forehead with bitemporal constriction, hypoplastic supraorbital ridges, downslanting palpebral fissures, a depressed nasal bridge, posteriorly angulated ears with prominent helices), heart defects (pulmonic stenosis, atrial septal defect, and hypertrophic cardiomyopathy), and mental retardation. Ectodermal abnormalities such as sparse and friable hair, hyperkeratotic skin lesions, and a generalized ichthyosis-like condition
  • Incidence: Mutations in KRAS in 5% of the Noonan population.
  • Comments:
  • Studies: (4)
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 G6PC3 edit association
  • Support: likely: 2 or more patients (with CHD and a mutation in the candidate gene)
  • References: PMID:20799326 (single case report modify) PMID:20717171 (single case report modify)
  • Syndromes: Autosomal recessive severe congenital neutropenia (SCN4) or Dursun syndrome (OMIM:613034): triad of familial PPH, leucopenia, and atrial septal defect (ASD)
  • Incidence: rare autosomal recessive disorder
  • Comments:
  • Studies: (2)
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 GPC3 edit association
  • Support: unconfirmed: a single case report
  • References: PMID:10232747 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: Simpson-Golabi-Behmel syndrome (OMIM:312870) is an X-linked condition characterized by pre- and postnatal overgrowth, coarse facies and congenital heart defects (ASD, VSD, AVSD).
  • Incidence:
  • Comments:
  • Studies: (1)
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 GJA1 edit association
  • Support: unconfirmed: a single case report
  • References: PMID:12457340 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: Oculodentodigital dysplasia (ODDD) OMIM:164200: this autosomal dominant syndrome presents with craniofacial (ocular, nasal, and dental) and limb dysmorphisms, spastic paraplegia, and neurodegeneration. Syndactyly type III and conductive deafness can occur in some cases, and cardiac abnormalities are observed in rare instances.
  • Incidence: 2 out of 17 families with ODDD, described by Paznekas WA et al., 2003, had cardiac abnormalities.
  • Comments:
  • Studies: (1)
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 BRAF edit association
  • Support: confirmed: 2 or more independent reports > 1% incidence
  • References: PMID:16474404 (population study with screening of similar CHD patients and normal controls modify) PMID:17704260 (population study with screening of similar CHD patients and normal controls modify) PMID:19206169 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: Mutations in BRAF are detected in Noonan syndrome, Cardio-facio-cutaneous syndrome and LEOPARD syndrome:
    • Noonan Syndrome (NS3) (OMIM:609942 or OMIM:163950): autosomal dominant condition characterized by short stature, distinctive facial appearance (triangular face with ptosis, blue-green irides and low posterior hairline or webbed neck), congenital heart defects (pulmonic stenosis, septal defects, and hypertrophic cardiomyopathy) and Woolly-like consistency of hair.
    • Cardiofaciocutaneous (CFC) syndrome (OMIM:115150): autosomal dominant condition characterized by distinctive facial appearance (high forehead with bitemporal constriction, hypoplastic supraorbital ridges, downslanting palpebral fissures, a depressed nasal bridge, posteriorly angulated ears with prominent helices), heart defects (pulmonic stenosis, atrial septal defect, and hypertrophic cardiomyopathy), and mental retardation. Ectodermal abnormalities such as sparse and friable hair, hyperkeratotic skin lesions, and a generalized ichthyosis-like condition
    • LEOPARD syndrome (OMIM:151100: autosomal dominant condition characterized by Lentigines, Electrocardiographic conduction abnormalities, Ocular hypertelorism, Pulmonary stenosis, Abnormal genitalia, Retarded growth and sensorineural Deafness.
  • Incidence:
  • Comments:
  • Studies: (3)
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 NSD1 edit association
  • Support: confirmed: 2 or more independent reports > 1% incidence
  • References: PMID:15742365 (population study with screening of similar CHD patients and normal controls modify) PMID:16329110 (single case report modify)
  • Syndromes: SOTOS syndrome (OMIM:117550): prenatal and postnatal overgrowth, advanced bone age, prominent pointed chin, frontal bossing, hypertelorism or telecanthus, downslanting palpebral fissures, a high arched palate, flat nasal bridge, epicanthic folds, and large hands and feet. Mild to moderate developmental delay, often with behaviour problems, and an emotional immaturity that persists into adulthood; neonatal jaundice and feeding difficulties, clumsiness and incoordination; formation of solid tumours (Wilms tumour, hepatic tumours); CHD in 8-50%.
  • Incidence: 59 patients with congenital overgrowth; 24/59 SOTOS; NSD1 mutations in 16/24 SOTOS (7/16 with CHD; 4/7 ASD); (PMID:15742365); case report of 1 patient with congenital overgrowth (features of Nevo syndrome with ASD) (PMID:16329110)
  • Comments:
  • Studies: (1)
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 MLL2 edit association
  • Support: confirmed: 2 or more independent reports > 1% incidence
  • References: PMID:20711175 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: Kabuki syndrome (OMIM:147920) is characterized by mental retardation, postnatal growth delay, facial dysmorphism (long palpebral fissures with eversion of the lateral third of the lower eyelids (reminiscent of the make-up of actors of Kabuki, a Japanese traditional theatrical form), a broad and depressed nasal tip, large prominent earlobes, a cleft or high-arched palate, scoliosis, short fifth finger, fetal pads, and radiographic abnormalities of the vertebrae, hands, and hip joints.
  • Incidence: Kabuki syndrome has an estimated incidence of 1 in 32,000 (Niikawa N et al., 1988).
  • Comments:
  • Studies: (1)
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 MAP2K1/MEK1 edit association
  • Support: likely: 2 or more patients (with CHD and a mutation in the candidate gene)
  • References: PMID:17704260 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: Cardiofaciocutaneous (CFC) syndrome (OMIM:115150) is an autosomal dominant disorder characterized by distinctive facial appearance (high forehead with bitemporal constriction, hypoplastic supraorbital ridges, downslanting palpebral fissures, a depressed nasal bridge, posteriorly angulated ears with prominent helices), heart defects (pulmonic stenosis, atrial septal defect, and hypertrophic cardiomyopathy), and mental retardation. Ectodermal abnormalities such as sparse and friable hair, hyperkeratotic skin lesions, and a generalized ichthyosis-like condition
  • Incidence:
  • Comments:
  • Studies: (1)
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 SIP1/ZEB2/ZFHX1B edit association
  • Support: unconfirmed: a single case report
  • References: PMID:11891681 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: Mowat-Wilson Syndrome (OMIM:235730) is a distinctive entity consisting of severe mental retardation, recognisable facial gestalt, pre- or postnatal microcephaly, and postnatal growth retardation, as well as seizures (82%) and malformations such as Hirschsprung disease (67.6%), congenital heart defects (47%), and agenesis of the corpus callosum (35%).
  • Incidence:
  • Comments:
  • Studies: (1)
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 CHD7 edit association
  • Support: confirmed: 2 or more independent reports > 1% incidence
  • References: PMID:16615981 (population study with screening of similar CHD patients and normal controls modify) PMID:16155193 (population study with screening of similar CHD patients and normal controls modify) PMID:18445044 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: CHARGE syndrome (OMIM:214800): Coloboma, Heart defect (ASD, VSD, and parachute mitral valve, ToF), Atresia choanae, Retarded growth and development, Genital hypoplasia, Ear anomalies/deafness.
  • Incidence: Mutations in CHD7 were found in 17 out of 24 patients with CHARGE phenotype, 13 out of 17 patietns had a congenital heart defect: 3 patients with patent ductus arteriosus and atrial septum defect (Aramaki et al., 2006). 69 mutations in CHD7 were found in 47 out of 107 index patients with CHARGE phenotype, 31 out of 47 patients had a congenital heart defect, of which 6 patients with PDA combined with ASD, and/or VSD and 4 patients with a solitary septal defect (not further specified) (Jongmans et al., 2006). 18 mutations (15 point mutations, 2 exon deletions and 1 whole gene deletion) were identified in 18 out of 28 Swedish patients with CHARGE phenotype by Wincent J et al., 2008. An atrial septal defect in combination with an Epstein malformation, was present in one member of a monozygotic twin carrying a de novo nonsense mutation in CHD7.
  • Comments:
  • Studies: (2)
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 EVC2 edit association
  • Support: likely: 2 or more patients (with CHD and a mutation in the candidate gene)
  • References: PMID:12571802 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: Ellis-van Creveld (OMIM:225500): autosomal recessive syndrome characterized by short limbs, short ribs, polydactyly, nail and teeth dysplasia as well as cardiac defects
  • Incidence:
  • Comments:
  • Studies: (1)
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 HRAS edit association
  • Support: unconfirmed: a single case report
  • References: PMID:16170316 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: Costello Syndrome (OMIM:218040): coarse face (epicanthal folds, large, depressed nasal bridge, and large earlobes), short stature, redundant skin of the neck, palms, soles, and fingers; curly hair, papillomata around the mouth and nares, congenital heart defects in 30% (most commonly pulmonic stenosis), cardiac hypertrophy in 34%, rythm disturbances in 33% (most commonly atrial tachycardia) and mental retardation
  • Incidence:
  • Comments:
  • Studies: (1)
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 PTPN11 edit association
  • Support: confirmed: 2 or more independent reports > 1% incidence
  • References: PMID:17515436 (population study with screening of similar CHD patients and normal controls modify) PMID:15723289 (population study with screening of similar CHD patients and normal controls modify) PMID:12960218 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: Noonan Syndrome 1 (NS1) (OMIM:163950): autosomal dominant condition characterized by short stature, distinctive facial appearance (triangular face with ptosis, blue-green irides and low posterior hairline or webbed neck), congenital heart defects (pulmonic stenosis, septal defects, and hypertrophic cardiomyopathy) and Woolly-like consistency of hair.
  • Incidence: Sznayer et al. reports an incidence of 26% (26 out of 104) of atrial septum defect in Noonan patients that carry a PTPN11 mutation.
  • Comments:
  • Studies: (3)
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 RBM10 edit association
  • Support: likely: 2 or more patients (with CHD and a mutation in the candidate gene)
  • References: PMID:20451169 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: TARP syndrome (OMIM:311900): an X-linked disorder characterized by Talipes equinovarus, Atrial septal defect, Robin sequence, and Persistent left superior vena cava, and associated with 100% pre- or postnatal lethality in affected males.
  • Incidence: rare, X-linked disorder
  • Comments:
  • Studies: (1)
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 BCOR edit association
  • Support: confirmed: 2 or more independent reports > 1% incidence
  • References: PMID:15004558 (population study with screening of similar CHD patients and normal controls modify) PMID:19367324 (population study with screening of similar CHD patients and normal controls modify)
  • Syndromes: Oculofaciocardiodental Syndrome (OFCD) (OMIM:300166) is a distinct form of syndromic microphthalmia with congenital cataracts, narrow face, broad nasal tip with separated cartilage, cleft palate, and cardiac and dental anomalies (canine radiculomegaly, root dilacerations, oligodontia and retained deciduous teeth). OFCD is presumed to be inherited in an X-linked dominant pattern with male lethality.
  • Incidence:
  • Comments:
  • Studies: (2)
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Regions for phenotype 05.04.01:ASD

Region Patients References OMIM Comments
chr5:D5S2088-D5S807 edit region / PMID:9610535 (population study with screening of similar CHD patients and normal controls modify) OMIM:108800 locus between D5S2088 and D5S807

Some family member were also affected by an Atrial Septal Aneurism or a Left Superior Vena Cava

chr9:D9S167-D9S1682 edit region 2/12 PMID:21386876 (single case report modify) OMIM: Van de Meerakker JB et al., 2010 performed genome-wide linkage analysis in a large four-generation family with autosomal dominant CHD (including ASD type I and II, tetralogy of Fallot and persistent left superior vena cava) and low atrial rhythm. Genome-wide linkage analysis on 12 affected, 5 unaffected individuals and 1 obligate carrier demonstrated significant linkage only to chromosome 9q21–33 with a multipoint maximum LOD score of 4.1 at marker D9S1690. Sequence analysis of 9 out of 402 candidate genes in this 39 Mb region (INVS, TMOD1, TGFBR1, KLF4, IPPK, BARX1, PTCH1, MEGF9 and S1PR3) revealed no mutations. All 12 affected family members presented with a low atrial rhythm. In addition, four affected subjects presented with a persistent left superior caval vein, two with ASD type II, two with ASD type I (incomplete AVSD), and one with Tetralogy of Fallot.
chr10:2785366-2888143 edit region 10/18 PMID:21169613 (single case report modify) OMIM: Tremblay N et al., 2011 maps a rare familial form of ASD/VSD/septal aneurysms to chromosome 10p15. Eighteen family members in three generations could be studied, out of whom 10 are affected (2 ASD, 3 septal aneurysm, 4 VSD, and 1 tetralogy of Fallot). Parametric multipoint LOD scores reach significance on chromosome 10p15.3-10p15.2 (max. 3.29).

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Translocations 05.04.01:ASD

Region References OMIM Comments
chr9:139755250-139755551 edit translocation PMID:15805155 (single case report modify) OMIM:610253 Kleefstra T et al., 2005 report on a balanced de novo translocation (X;9)(p11.23;q34.3) in a girl with developmental delay, behavioral problems (autism and automutilation), seizures, an ASD type II, brachycephaly and facial dysmorphic features suggestive of 9q deletion syndrome (synophrys, upslanting of the palpebral fissures, hypertelorism, mid-face hypoplasia, broad nasal bridge, anteverted nares, protrusion of the tongue, thickened lower lip, pointed chin, and small ears).

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Patients reports for 05.04.01:ASD

  • case 4 Clinical data Phenotype
  • case 6 Clinical data Phenotype
  • case 7 Clinical data Phenotype


Automated text-mining genes found for 05.04.01:ASD

AGeneApart Method

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This page contributors

  • Jeroen Breckpot - CME Leuven (Belgium) (association, mutation, study, translocation)

  • yaojuan jia - institute for human genetics (Belgium) (association)


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